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Cognitive Codebase AI Evolution Center

Last Updated: 2026-02-11
Purpose: Permanent, queryable archive of the codex AI agency evolution — from conception through emergence to autonomous operation.
Audience: AI agents, human contributors, and future cognitive systems

Document Purpose
Evolution Timeline Complete phase-by-phase history with verified status
Planset Registry Queryable catalog of all plansets (PS-01 → PS-14)
Cognitive Evolution Tree Mermaid-based evolutionary process mapping tree
AI Emergence Storyboard Biographical storyline of AI autonomy, conception, and emergence
AI Agency Intuitiveness Score V3 ACE-aligned 6-layer scoring (93.2/100)
Cognitive Codebase Map Component-level AI intuitiveness mapping (35 components)

🔑 Key Concepts

This documentation center implements cutting-edge patterns for cognitive AI agency:

  • Knowledge Graph Structure: Documents are cross-referenced and queryable, forming a persistent knowledge graph accessible via GitHub Pages
  • Evolutionary Process Mapping: Mermaid diagrams trace the lineage from foundation through emergence
  • Hybrid Neuro-Symbolic Architecture: Combining structured planset tracking (symbolic) with adaptive cognitive brain patterns (neural)
  • Multi-Agent Coordination: 53+ specialized agents documented with evolution trajectories

📊 Quick Status

Metric Value Verified
Total Phases 18+ (Cycles 1-4) 2026-02-11
Completed Phases 1-10 ✅
Active Phases 11-12 🟢
Planned Phases 13-18 🟡
Plansets (PS) 11 complete, 3 active, 1 planning ✅
Active Plansets PS-11, PS-12, PS-13 🟢
Autonomous Agents 53+ ✅
Test Coverage 75% threshold ✅
Tests Passing 20500+ ✅
Security (CVEs Fixed) 26 ✅
AAIS V3.0 Score 93.2/100 (A) ✅
Cognitive Map Components 35 scored ✅

🏗️ Architecture

docs/evolution/
├── INDEX.md                        ← You are here
├── EVOLUTION_TIMELINE.md           ← Phase-by-phase verified history
├── PLANSET_REGISTRY.md             ← Queryable planset catalog
├── COGNITIVE_EVOLUTION_TREE.md     ← Mermaid evolution diagrams
├── AI_EMERGENCE_STORYBOARD.md      ← AI biographical storyline
├── AI_AGENCY_INTUITIVENESS_SCORE_V3.md ← ACE-aligned scoring framework
└── COGNITIVE_CODEBASE_MAP.md       ← Component-level intuitiveness map

Backing Data (in .codex/cognitive_brain/):

.codex/cognitive_brain/
├── ps01_status.md → ps10_status.md   ← Individual planset records
├── ps07_10_roadmap.md                ← Implementation roadmap
├── status/                           ← 31 versioned status snapshots
├── patterns/                         ← Learned architectural patterns
├── archive/                          ← Historical artifacts
└── COGNITIVE_BRAIN_AGENT_EVOLUTION_MAP.md ← Agent evolution tracking

📚 References